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174. Development of a Machine Learning Prediction Model to Select Empirical Antibiotics in Patients with Clinically Suspected Urinary Tract Infection using Urine Culture Data

Chungsoo Kim, Rae Woong Park, S. Rhie

Open Forum Infectious Diseases, 2021

1 citation

Abstract

Abstract Background Increasing antimicrobial resistance and the emergence of superbugs are problems globally. Inappropriate empiric antibiotic use would be a reason to cause antibiotic resistance. However, it has been a challenge to prescribe empiric antibiotics as it is difficult to identify the causative organism beforehand. In this study, we aimed to develop a prediction model to estimate the risk of antibiotics resistance using urine culture tests. Methods The study population included adult patients who had at least one of the results from a urine culture test and antibiotic susceptibility tests (from ampicillin, ceftriaxone, ciprofloxacin, gentamicin, levofloxacin, nitrofurantoin, tetracycline, trimethoprim/sulfamethoxazole) on admission to Ajou University Medical Center. Outcomes were defined as a resistant or intermediate susceptibility. Candidate predictors were diagnosis, prescription, visit, laboratory, procedures of the study population. We split data to 75:25 for training and test. Lasso logistic regression (LLR), extreme gradient boosting machine (XGB), Random Forest (RF) were used as model algorithms. The models were evaluated by an area under the curve of receiver operator characteristics curve (AUROC), precision-recall curve (AUPRC), and its calibration. All codes are available in https://github.com/ABMI/AbxBetterChoice Results Total 33 covariates were selected for final prediction models. The RF showed the highest AUROC in the ceftriaxone and tetracycline…

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