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Mechanistic and quantitative understanding of antibiotic resistance and adaptation of Escherichia coli under levofloxacin exposure

Johanna Seeger

2021

Abstract

Successful treatment of infectious diseases is increasingly challenging, as emergence and spread of bacterial adaptation and resistance mechanisms threaten the availability of efficacious treatment options. A prerequisite for bacterial eradication and prevention of adaptation and resistance is sufficient antibiotic exposure at target site, which can be obtained by dosing optimisation. For that purpose, a comprehensive understanding of the relationship between pharmacokinetics (PK) and pharmacodynamics (PD), i.e., between antibiotic exposure and effect, is crucial. Currently applied PK/PD parameters and target values are mainly based on the minimal inhibitory concentration (MIC). The informative value of this endpoint measurement is limited, but appropriate alternatives are currently lacking. A comprehensive understanding of exposure-effect relationships requires knowledge about relevant antibiotic resistance and bacterial adaptation mechanisms, which has substantially increased in the last years. However, a link between PK/PD relationships and the underlying mechanisms has not been established yet. Hence, the present thesis aimed to characterise, quantify, and mechanistically explain bacterial growth-kill behaviour over time. The model compound levofloxacin (LEV) and the bacterial species Escherichia coli (E. coli) were chosen for the case study, as life-threatening infections with fluoroquinolone resistant E. coli strains are of clinically relevant concern. To characterise…

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