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Multi-omics analyses to assess the effects of multi-layer cultivation with supplemental LED lighting on potato yield and quality

Pannico A, Duri LG, De Pascale S, Arouna N, Troise AD, Ferracane R, Esposito M, Caira S et al.

Frontiers in plant science, 2026

Abstract

Integrating a vertical layout into greenhouse allows space-efficient cultivation and energy saving; however, shading of the lower canopy makes supplemental artificial lighting necessary. Here, we investigated the effect of red-blue LED supplementation in a vertical greenhouse system for potato cultivation on plant growth, tuber yield, and mineral and metabolite composition, compared to full natural sunlight as a control. Cultivation units were designed to simulate a multiple-layer growing system, in which the uppermost level received only natural light, while LEDs integrated reduced light intensity in the shaded lower level up to 300 µmol m-2 s-1. Despite the lower daily light integral, LED-supplemented plants showed higher photosynthetic activity and slower decline in leaf chlorophyll content over time, which contributed to higher tuber yield compared to the control. Multi-omics analyses on tuber tissues revealed coordinated metabolic reprogramming. Transcriptomic data showed up-regulation of genes involved in photosynthesis, sugar metabolism, and polyamine biosynthesis in LED-treated plants, together with down-regulation of stress-related genes. Proteomic and metabolomic profiling partially confirmed such trends, highlighting a down-representation of stress-responsive proteins as well as reduced levels of polyphenols, glycoalkaloids and enzymes related to their biosynthesis, highlighting an overall metabolic shift toward an attenuated stress response. In parallel, plants…

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