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A Context-Conditional Audit of Trial-Pairing-Dependent Neural Gain in Motor-Cortex Decoding

Du Z, Lai ZY, Hu L, Ye T

2026

Abstract

Objective: Neural-only decoding performance does not identify how much prediction neural history adds beyond task structure or recent output. We tested how this increment changes when context and temporal information boundaries are made explicit.

Approach: We defined context-conditional neural gain as held-out error reduction from adding context-residualized neural history to a context model. Fully nested, whole-trial cross-fitting excluded predicted trials from nuisance preprocessing, fitting, and selection. Trial replacement tested reliance on correct neural–behavioral pairing. Matched-seed calibration and linear and nonlinear sensitivities accompanied two Neural Latents Benchmark datasets, nine paired LINK dates (18 development sessions), and 20 prespecified untouched LINK sessions from the same macaque.

Main results: In LINK, fixed neural-only R 2 near 0.31 coexisted with gains of 0.3012/0.3125 beyond phase, 0.0193/0.0209 beyond geometry by phase, and 0.0077/0.0098 beyond that context plus measured-output history for center-out/random-target tasks. Fully nested analysis retained positive means for two neural feature definitions; replacement made all four negative. Geometry-conditional spiking-band-power gain reduced context-model mean squared error by 4.92%. In the untouched sample, geometry-conditional gain was positive in 20/20 sessions (mean 0.02158), contracted to 0.00755 with measured-output history, and exceeded replacement in 20/20. MC_Maze showed gain 0.00051…

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