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Gut microbiome characteristics in patients with hormone receptor–positive (HR+) HER2− breast cancer treated with adjuvant abemaciclib: Biomarker analysis of the TRADE trial

I. Schlam, E. A. Green, X. Morgan, J. Baginska, Ashka Patel, S. Kim, H. Heiling, E. Wallace et al.

Journal of Clinical Oncology, 2026

90 participants

Abstract

563

Background:

Adjuvant abemaciclib reduces recurrence risk and improves overall survival in patients with high-risk node-positive early HR+/HER2- breast cancer. However, treatment-emergent diarrhea may lead to dose modifications, treatment discontinuation, and impaired quality of life. The gut microbiome influences treatment response and toxicity across multiple cancer therapies; its role in abemaciclib-associated diarrhea remains undefined. We evaluated features of the gut microbiome during the initiation of adjuvant abemaciclib and any association with diarrhea.

Methods:

90 patients with HR+/HER2− early breast cancer enrolled in the TRADE trial (NCT06001762) and were treated with dose-escalated adjuvant abemaciclib (50 mg BID x 14 days, then 100 mg BID x 14 days, then 150 mg BID onwards) plus endocrine therapy. Stool samples were collected at baseline, cycle 2 day 1 (C2D1), and end of treatment (EOT). Whole-genome shotgun metagenomic sequencing was performed, and species-level profiles were generated using MetaPhlAn4. Diarrhea was analyzed as a binary outcome (ever vs none). Associations between microbiome features and clinical variables were evaluated using linear mixed modeling with a random effect for repeated samples from the same individual (alpha diversity) or per-timepoint using PERMANOVA (beta diversity) and MaAsLin3 (species and genes, with false discovery rate correction). Models were adjusted for age, cancer stage, and type of endocrine therapy.

Results:

A…

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