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Beyond Jacob’s Ladder: A Physics-driven AI Approach to Density Functional Theory

Pas E, Halat P, Stella F, Khurana R, Crouch S, Wang N

2026

Abstract

Abstract Density Functional Theory (DFT) has become a widely used approach for accurate prediction of electronic structure and thermodynamic properties of molecular systems - from single molecules to large-scale systems. Although the accuracy of DFT functionals has significantly improved over the last decade, this is typically achieved through inclusion of more complexity in the functional’s description and larger basis sets. This significantly prevents applications of DFT to realistic molecular systems beyond single medium-sized molecules. The recent development of AlphaFold has demonstrated AI algorithms’ ability to learn physics, whereby achieving tremendous predictive power for the structure of peptides. Here we show that the inclusion of a more complex formulation in DFT can be overcome by training a machine learning (ML) code, termed ML-DFT, to extract the needed information from molecule’s electron density using a neural network, whereby robustly learning essential physics governing the behaviour of molecular systems. The ML code was trained to predict atomisation energies of molecules of varying functionality and intermolecular interaction energies of diverse neutral and charged molecular complexes, producing accuracy below of 1 kcal/mol and outperforming the best available DFT functionals. This remarkable outcome was achieved by constructing the loss function based on relative electronic energies to directly compare with thermodynamic properties – atomisation…

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